Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952042.1_cds_XP_016491877.1_82151
CDS Infomation

[gene=LOC107811464] [db_xref=GeneID:107811464] [protein=jasmonic acid-amido synthetase JAR1-like isoform X2] [protein_id=XP_016491877.1] [location=complement(join(34474..35015,35462..36249,36971..37072,38104..38405))] [gbkey=CDS]
Sequence

ATGAAAACGGTGGTAGAGAAAACTGAGAAGTTTGATCCACAAGAAGTGATAGAGGAATTT
GAGGTGTTAACAAGAGATGCTGGCAAAATTCAAGAAGAGACCCTACAGAAGATTTTGGAA
GAAAATGGAGGGACAGAATATTTGCAACAATGGGGTCTAAATGGGAAAACTGATTCTCTA
TCTTTCAAGAATTGTGTACCCATTGTCACCCACAAGGATTTGGAACCTTACATTCATAGA
ATTGCTGATGGTGATCTTTCTCCCATTCTTACTGGAAAGCCTATTACCACTATCTCCTTG
AGTTCTGGGACAACTCAAGGAAAGCCAAAGTTTGTACCTTTCAATGAAGAATTGATGGAA
TCCACTATGCAAATATTCAAGACATCTTTTGCCTTTAGGAACAGAGAATTTCCAGTTGTA
AATGGGAAAGCTTTGCAGTTCATATATGGCAGCAAGCAATTCAAGACGAAGGGCGGTTTG
GCAGCTGGAACTGCCACTACCAATGTATACCGAAATGCACAATTCAAGAAGACAATGAAG
GCAATGCAGACCCCTTGTTGTAGCCCTGATGAAGTAATATTTGGCCCTGATTTCCAACAA
TCTTTGTACTGTCATCTTTTGTGTGGCCTCATTTTTCGCGATGAGGTTCAAGTCGTCTCT
TCTACATTTGCTCATAGTATAGTCCATGCTTTTCGAAATTTCGAACAAGTATGGCAAGAA
CTTGTTACCAACATAAGAGATGGAGTCCTTTCTAGCCGTGTGACAGTTCCTTCTATGAGA
GCAGCAATGTCGAAATTACTCAAGCCTGATCCCGAGCTTGCTGATACTATTTTTAACAAG
TGCAGCCGATTGAGCAATTGGTATGGCTTGATTCCAGCTCTTTTCCCGAACACTAGGTAC
ATATATGGTATCATGACTGGATCCATGGAACCGTACTTGAAGAAACTGAGGCATTATGCG
GGCGAGTTACCTCTGCTAAGTGCAGATTATGGATCTTCTGAAGGGTGGATTGGAGCAAAC
GTTAACCCCGAGTTGCCTCCCGAGCTTGTTACATATGCAGTACTTCCTAATATTGGTTAT
TTCGAATTCATTCCTCTCATGGAAAATTTAGACGGTCTGGAGCCTACGCCAGTCGGTTTA
ACTGAAGTTAAACTCGGCGAAGAGTATGAAATTGTAGTCACCAACTTTGCAGGTCTGTAT
CGCTATAGGCTCGGTGATGTTGTCAGGATAAAAGGATTCCATAATGGCACTCCAGAACTC
CAGTTTATTTGCCGTAGGAATCTCTTATTGAGCATCAACATTGACAAGAACACCGAGAAA
GACTTACAGCTAGCCGTAGAAGCAGCAGCCAAGATCTTATCAGACGAAAAGCTAGAAGTA
GTCGATTTCACGAGTCACGTGAACGTCTCAGCTGATCCGGGACACTATGTGATCTTCTGG
GAACTGAGTGGTGAGGCTAGTGAGGAAATCTTGAAAGAATGCTGCAATTGTTTGGACATA
TCTTTCGTCGATGCAGGCTATGTGGGCTCTCGGAAGGTCAACGCCATTGGAGCTCTTGAA
CTCCGAATTGTGAAGAGGGGAACATTCCATAAGATATTAGATCATTTTGTAGGATTAGGG
GCTGCAGTTAGCCAGTTCAAAACACCAAGGTGCGTCGGCCCGACTAATCTCTCTGTGCTG
CAAATACTGTCTAGCAATGTAGTTGAGAGCTATTTTAGTACTGCATTCTGTTGA

Peptide Sequence

PEP ID

XP_016491877.1
PEP Infomation

PREDICTED: jasmonic acid-amido synthetase JAR1-like isoform X2 [Nicotiana tabacum]
Sequence

MKTVVEKTEKFDPQEVIEEFEVLTRDAGKIQEETLQKILEENGGTEYLQQWGLNGKTDSL
SFKNCVPIVTHKDLEPYIHRIADGDLSPILTGKPITTISLSSGTTQGKPKFVPFNEELME
STMQIFKTSFAFRNREFPVVNGKALQFIYGSKQFKTKGGLAAGTATTNVYRNAQFKKTMK
AMQTPCCSPDEVIFGPDFQQSLYCHLLCGLIFRDEVQVVSSTFAHSIVHAFRNFEQVWQE
LVTNIRDGVLSSRVTVPSMRAAMSKLLKPDPELADTIFNKCSRLSNWYGLIPALFPNTRY
IYGIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWIGANVNPELPPELVTYAVLPNIGY
FEFIPLMENLDGLEPTPVGLTEVKLGEEYEIVVTNFAGLYRYRLGDVVRIKGFHNGTPEL
QFICRRNLLLSINIDKNTEKDLQLAVEAAAKILSDEKLEVVDFTSHVNVSADPGHYVIFW
ELSGEASEEILKECCNCLDISFVDAGYVGSRKVNAIGALELRIVKRGTFHKILDHFVGLG
AAVSQFKTPRCVGPTNLSVLQILSSNVVESYFSTAFC

Transcript Sequence

Gene sequence data has not been registered.